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Publications of year 2015
Theses
  1. Mélanie Strauss. Using Magneto-encephalography to Assess the Processing Depth of Auditory Stimuli in the Sleeping Human Brain.. PhD Thesis, Paris V, 2015. [bibtex-entry]


Book chapters
  1. Jessica Dubois and Ghislaine Dehaene-Lambertz. Fetal and Postnatal Development of the Cortex: MRI and Genetics. In Arthur W. Toga, editor,Brain Mapping: An Encyclopedic Reference, volume 2, pages 11--19. Academic Press: Elsevier, 2015. [PDF] [bibtex-entry]


  2. Jessica Dubois, Ivica Kostovic, and Milos Judas. Development of Structural and Functional Connectivity. In Arthur W. Toga, editor,Brain Mapping: An Encyclopedic Reference, volume 2, pages 423--437. Academic Press: Elsevier., 2015. [PDF] [bibtex-entry]


Articles in journals
  1. Sami Abboud, Shachar Maidenbaum, Stanislas Dehaene, and Amir Amedi. A number-form area in the blind.. Nat Commun, 6:6026, 2015. [WWW] [PDF]
    Abstract: Distinct preference for visual number symbols was recently discovered in the human right inferior temporal gyrus (rITG). It remains unclear how this preference emerges, what is the contribution of shape biases to its formation and whether visual processing underlies it. Here we use congenital blindness as a model for brain development without visual experience. During fMRI, we present blind subjects with shapes encoded using a novel visual-to-music sensory-substitution device (The EyeMusic). Greater activation is observed in the rITG when subjects process symbols as numbers compared with control tasks on the same symbols. Using resting-state fMRI in the blind and sighted, we further show that the areas with preference for numerals and letters exhibit distinct patterns of functional connectivity with quantity and language-processing areas, respectively. Our findings suggest that specificity in the ventral 'visual' stream can emerge independently of sensory modality and visual experience, under the influence of distinct connectivity patterns.
    [bibtex-entry]


  2. Pablo Barttfeld, Lynn Uhrig, Jacobo D. Sitt, Mariano Sigman, Béchir Jarraya, and Stanislas Dehaene. Signature of consciousness in the dynamics of resting-state brain activity.. Proc Natl Acad Sci U S A, 112(3):887--892, January 2015. [WWW] [PDF]
    Abstract: At rest, the brain is traversed by spontaneous functional connectivity patterns. Two hypotheses have been proposed for their origins: they may reflect a continuous stream of ongoing cognitive processes as well as random fluctuations shaped by a fixed anatomical connectivity matrix. Here we show that both sources contribute to the shaping of resting-state networks, yet with distinct contributions during consciousness and anesthesia. We measured dynamical functional connectivity with functional MRI during the resting state in awake and anesthetized monkeys. Under anesthesia, the more frequent functional connectivity patterns inherit the structure of anatomical connectivity, exhibit fewer small-world properties, and lack negative correlations. Conversely, wakefulness is characterized by the sequential exploration of a richer repertoire of functional configurations, often dissimilar to anatomical structure, and comprising positive and negative correlations among brain regions. These results reconcile theories of consciousness with observations of long-range correlation in the anesthetized brain and show that a rich functional dynamics might constitute a signature of consciousness, with potential clinical implications for the detection of awareness in anesthesia and brain-lesioned patients.
    [bibtex-entry]


  3. Audrey Bénézit, Lucie Hertz-Pannier, Ghislaine Dehaene-Lambertz, Karla Monzalvo, David Germanaud, Delphine Duclap, Pamela Guevara, Jean-François Mangin, Cyril Poupon, Marie-Laure Moutard, and Jessica Dubois. Organising white matter in a brain without corpus callosum fibres.. Cortex, 63C:155--171, September 2015. [WWW] [PDF]
    Abstract: Isolated corpus callosum dysgenesis (CCD) is a congenital malformation which occurs during early development of the brain. In this study, we aimed to identify and describe its consequences beyond the lack of callosal fibres, on the morphology, microstructure and asymmetries of the main white matter bundles with diffusion imaging and fibre tractography. Seven children aged between 9 and 13 years old and seven age- and gender-matched control children were studied. First, we focused on bundles within the mesial region of the cerebral hemispheres: the corpus callosum, Probst bundles and cingulum which were selected using a conventional region-based approach. We demonstrated that the Probst bundles have a wider connectivity than the previously described rostrocaudal direction, and a microstructure rather distinct from the cingulum but relatively close to callosal remnant fibres. A sigmoid bundle was found in two partial ageneses. Second, the corticospinal tract, thalamic radiations and association bundles were extracted automatically via an atlas of adult white matter bundles to overcome bias resulting from a priori knowledge of the bundles' anatomical morphology and trajectory. Despite the lack of callosal fibres and the colpocephaly observed in CCD, all major white matter bundles were identified with a relatively normal morphology, and preserved microstructure (i.e. fractional anisotropy, mean diffusivity) and asymmetries. Consequently the bundles' organisation seems well conserved in brains with CCD. These results await further investigations with functional imaging before apprehending the cognition variability in children with isolated dysgenesis.
    [bibtex-entry]


  4. Claire H. C. Chang, Christophe Pallier, Denise H. Wu, Kimihiro Nakamura, Antoinette Jobert, W-J. Kuo, and Stanislas Dehaene. Adaptation of the human visual system to the statistics of letters and line configurations.. Neuroimage, July 2015. [WWW] [PDF]
    Abstract: By adulthood, literate humans have been exposed to millions of visual scenes and pages of text. Does the human visual system become attuned to the statistics of its inputs? Using functional magnetic resonance imaging, we examined whether the brain responses to line configurations are proportional to their natural-scene frequency. To further distinguish prior cortical competence from adaptation induced by learning to read, we manipulated whether the selected configurations formed letters and whether they were presented on the horizontal meridian, the familiar location where words usually appear, or on the vertical meridian. While no natural-scene frequency effect was observed, we observed letter-status and letter frequency effects on bilateral occipital activation, mainly for horizontal stimuli. The findings suggest a reorganization of the visual pathway resulting from reading acquisition under genetic and connectional constraints. Even early retinotopic areas showed a stronger response to letters than to rotated versions of the same shapes, suggesting an early visual tuning to large visual features such as letters.
    [bibtex-entry]


  5. Stanislas Dehaene, Laurent Cohen, José Morais, and Régine Kolinsky. Illiterate to literate: behavioural and cerebral changes induced by reading acquisition. Nat Rev Neurosci, 16(4):234--244, April 2015. [WWW] [PDF]
    Abstract: The acquisition of literacy transforms the human brain. By reviewing studies of illiterate subjects, we propose specific hypotheses on how the functions of core brain systems are partially reoriented or 'recycled' when learning to read. Literacy acquisition improves early visual processing and reorganizes the ventral occipito-temporal pathway: responses to written characters are increased in the left occipito-temporal sulcus, whereas responses to faces shift towards the right hemisphere. Literacy also modifies phonological coding and strengthens the functional and anatomical link between phonemic and graphemic representations. Literacy acquisition therefore provides a remarkable example of how the brain reorganizes to accommodate a novel cultural skill.
    [bibtex-entry]


  6. Stanislas Dehaene, Yadin Dudai, and Christina Konen. Cognitive Architectures. Neuron, Volume 88, Issue 1, 7 October 2015:1, 2015. [WWW] [PDF] [bibtex-entry]


  7. Stanislas Dehaene, Florent Meyniel, Catherine Wacongne, Liping Wang, and Christophe Pallier. The Neural Representation of Sequences: From Transition Probabilities to Algebraic Patterns and Linguistic Trees.. Neuron, 88(1):2--19, October 2015. [WWW] [PDF]
    Abstract: A sequence of images, sounds, or words can be stored at several levels of detail, from specific items and their timing to abstract structure. We propose a taxonomy of five distinct cerebral mechanisms for sequence coding: transitions and timing knowledge, chunking, ordinal knowledge, algebraic patterns, and nested tree structures. In each case, we review the available experimental paradigms and list the behavioral and neural signatures of the systems involved. Tree structures require a specific recursive neural code, as yet unidentified by electrophysiology, possibly unique to humans, and which may explain the singularity of human language and cognition.
    [bibtex-entry]


  8. G Dehaene-Lambertz and E. Spelke. The Infancy of the Human Brain. Neuron, Volume 88, Issue 1, 7 October 2015:93--109, 2015. [WWW] [PDF] [bibtex-entry]


  9. E. Eger, P. Pinel, S. Dehaene, and A. Kleinschmidt. Spatially Invariant Coding of Numerical Information in Functionally Defined Subregions of Human Parietal Cortex. Cereb Cortex, May 2015(25):1319--1329, November 2015. [WWW] [PDF]
    Abstract: Macaque electrophysiology has revealed neurons responsive to number in lateral (LIP) and ventral (VIP) intraparietal areas. Recently, fMRI pattern recognition revealed information discriminative of individual numbers in human parietal cortex but without precisely localizing the relevant sites or testing for subregions with different response profiles. Here, we defined the human functional equivalents of LIP (feLIP) and VIP (feVIP) using neurophysiologically motivated localizers. We applied multivariate pattern recognition to investigate whether both regions represent numerical information and whether number codes are position specific or invariant. In a delayed number comparison paradigm with laterally presented numerosities, parietal cortex discriminated between numerosities better than early visual cortex, and discrimination generalized across hemifields in parietal, but not early visual cortex. Activation patterns in the 2 parietal regions of interest did not differ in the coding of position-specific or position-independent number information, but in the expression of a numerical distance effect which was more pronounced in feLIP.Thus, the representation of number in parietal cortex is at least partially position invariant. Both feLIP and feVIP contain information about individual numerosities in humans, but feLIP hosts a coarser representation of numerosity than feVIP, compatible with either broader tuning or a summation code.
    [bibtex-entry]


  10. Denis A. Engemann and Alexandre Gramfort. Automated model selection in covariance estimation and spatial whitening of MEG and EEG signals. Neuroimage, 108:328--342, March 2015. [WWW] [PDF]
    Abstract: Magnetoencephalography and electroencephalography (M/EEG) measure non-invasively the weak electromagnetic fields induced by post-synaptic neural currents. The estimation of the spatial covariance of the signals recorded on M/EEG sensors is a building block of modern data analysis pipelines. Such covariance estimates are used in brain-computer interfaces (BCI) systems, in nearly all source localization methods for spatial whitening as well as for data covariance estimation in beamformers. The rationale for such models is that the signals can be modeled by a zero mean Gaussian distribution. While maximizing the Gaussian likelihood seems natural, it leads to a covariance estimate known as empirical covariance (EC). It turns out that the EC is a poor estimate of the true covariance when the number of samples is small. To address this issue the estimation needs to be regularized. The most common approach downweights off-diagonal coefficients, while more advanced regularization methods are based on shrinkage techniques or generative models with low rank assumptions: probabilistic PCA (PPCA) and factor analysis (FA). Using cross-validation all of these models can be tuned and compared based on Gaussian likelihood computed on unseen data. We investigated these models on simulations, one electroencephalography (EEG) dataset as well as magnetoencephalography (MEG) datasets from the most common MEG systems. First, our results demonstrate that different models can be the best, depending on the number of samples, heterogeneity of sensor types and noise properties. Second, we show that the models tuned by cross-validation are superior to models with hand-selected regularization. Hence, we propose an automated solution to the often overlooked problem of covariance estimation of M/EEG signals. The relevance of the procedure is demonstrated here for spatial whitening and source localization of MEG signals.
    [bibtex-entry]


  11. Alice Gomez, Manuela Piazza, Antoinette Jobert, Ghislaine Dehaene-Lambertz, Stanislas Dehaene, and Caroline Huron. Mathematical difficulties in developmental coordination disorder: Symbolic and nonsymbolic number processing.. Res Dev Disabil, 43-44:167--178, 2015. [WWW]
    Abstract: At school, children with Developmental Coordination Disorder (DCD) struggle with mathematics. However, little attention has been paid to their numerical cognition abilities. The goal of this study was to better understand the cognitive basis for mathematical difficulties in children with DCD. Twenty 7-to-10 years-old children with DCD were compared to twenty age-matched typically developing children using dot and digit comparison tasks to assess symbolic and nonsymbolic number processing and in a task of single digits additions. Results showed that children with DCD had lower performance in nonsymbolic and symbolic number comparison tasks than typically developing children. They were also slower to solve simple addition problems. Moreover, correlational analyses showed that children with DCD who experienced greater impairments in the nonsymbolic task also performed more poorly in the symbolic tasks. These findings suggest that DCD impairs both nonsymbolic and symbolic number processing. A systematic assessment of numerical cognition in children with DCD could provide a more comprehensive picture of their deficits and help in proposing specific remediation.
    [bibtex-entry]


  12. Thomas Hannagan, Amir Amedi, Laurent Cohen, Ghislaine Dehaene-Lambertz, and Stanislas Dehaene. Origins of the specialization for letters and numbers in ventral occipitotemporal cortex. Trends Cogn Sci, June 2015. [WWW]
    Abstract: Deep in the occipitotemporal cortex lie two functional regions, the visual word form area (VWFA) and the number form area (NFA), which are thought to play a special role in letter and number recognition, respectively. We review recent progress made in characterizing the origins of these symbol form areas in children or adults, sighted or blind subjects, and humans or monkeys. We propose two non-mutually-exclusive hypotheses on the origins of the VWFA and NFA: the presence of a connectivity bias, and a sensitivity to shape features. We assess the explanatory power of these hypotheses, describe their consequences, and offer several experimental tests.
    [bibtex-entry]


  13. Yi-Hui Hung, Christophe Pallier, Stanislas Dehaene, Yi-Chen Lin, Acer Chang, Ovid J-L. Tzeng, and Denise H. Wu. Neural correlates of merging number words.. Neuroimage, 122:33--43, July 2015. [WWW] [PDF]
    Abstract: Complex number words (e.g., "twenty two") are formed by merging together several simple number words (e.g., "twenty" and "two"). In the present study, we explored the neural correlates of this operation and investigated to what extent it engages brain areas involved processing numerical quantity and linguistic syntactic structure. Participants speaking two typologically distinct languages, French and Chinese, were required to read aloud sequences of simple number words while their cerebral activity was recorded by functional magnetic resonance imaging. Each number word could either be merged with the previous ones (e.g., 'twenty three') or not (e.g., 'three twenty'), thus forming four levels ranging from lists of number words to complex numerals. When a number word could be merged with the preceding ones, it was named faster than when it could not. Neuroimaging results showed that the number of merges correlated with activation in the left inferior frontal gyrus and in the left inferior parietal lobule. Consistent findings across Chinese and French participants suggest that these regions serve as the neural bases for forming complex number words in different languages.
    [bibtex-entry]


  14. Anne-Lise Jouen, Timothy Ellmore, Carol Madden-Lombardi, Christophe Pallier, Peter Ford Dominey, and Jocelyne Ventre-Dominey. Beyond the word and image: characteristics of a common meaning system for language and vision revealed by functional and structural imaging.. Neuroimage, 106:72--85, February 2015. [WWW] [PDF]
    Abstract: This research tests the hypothesis that comprehension of human events will engage an extended semantic representation system, independent of the input modality (sentence vs. picture). To investigate this, we examined brain activation and connectivity in 19 subjects who read sentences and viewed pictures depicting everyday events, in a combined fMRI and DTI study. Conjunction of activity in understanding sentences and pictures revealed a common fronto-temporo-parietal network that included the middle and inferior frontal gyri, the parahippocampal-retrosplenial complex, the anterior and middle temporal gyri, the inferior parietal lobe in particular the temporo-parietal cortex. DTI tractography seeded from this temporo-parietal cortex hub revealed a multi-component network reaching into the temporal pole, the ventral frontal pole and premotor cortex. A significant correlation was found between the relative pathway density issued from the temporo-parietal cortex and the imageability of sentences for individual subjects, suggesting a potential functional link between comprehension and the temporo-parietal connectivity strength. These data help to define a "meaning" network that includes components of recently characterized systems for semantic memory, embodied simulation, and visuo-spatial scene representation. The network substantially overlaps with the "default mode" network implicated as part of a core network of semantic representation, along with brain systems related to the formation of mental models, and reasoning. These data are consistent with a model of real-world situational understanding that is highly embodied. Crucially, the neural basis of this embodied understanding is not limited to sensorimotor systems, but extends to the highest levels of cognition, including autobiographical memory, scene analysis, mental model formation, reasoning and theory of mind.
    [bibtex-entry]


  15. C. Kabdebon, M. Pena, M. Buiatti, and G. Dehaene-Lambertz. Electrophysiological evidence of statistical learning of long-distance dependencies in 8-month-old preterm and full-term infants.. Brain Lang, 148:25--36, September 2015. [WWW] [PDF]
    Abstract: Using electroencephalography, we examined 8-month-old infants' ability to discover a systematic dependency between the first and third syllables of successive words, concatenated into a monotonous speech stream, and to subsequently generalize this regularity to new items presented in isolation. Full-term and preterm infants, while exposed to the stream, displayed a significant entrainment (phase-locking) to the syllabic and word frequencies, demonstrating that they were sensitive to the word unit. The acquisition of the systematic dependency defining words was confirmed by the significantly different neural responses to rule-words and part-words subsequently presented during the test phase. Finally, we observed a correlation between syllabic entrainment during learning and the difference in phase coherence between the test conditions (rule-words vs part-words) suggesting that temporal processing of the syllable unit might be crucial in linguistic learning. No group difference was observed suggesting that non-adjacent statistical computations are already robust at 8months, even in preterm infants, and thus develop during the first year of life, earlier than expected from behavioral studies.
    [bibtex-entry]


  16. Jonah Katz, Emmanuel Chemla, and Christophe Pallier. An Attentional Effect of Musical Metrical Structure. Plos One, 2015. [WWW] [PDF] [bibtex-entry]


  17. J Lebenberg, C Poupon, B Thirion, F Leroy, JF Mangin, G Dehaene-Lambertz, and J Dubois. Clustering the infant brain tissues based on microstructural properties and maturation assessment using multi-parametric MRI. IEEE ISBI, DOI 10.1109/ISBI.2015.7163837:148--151, 2015. [PDF] [bibtex-entry]


  18. François Leroy, Qing Cai, Stephanie L. Bogart, Jessica Dubois, Olivier Coulon, Karla Monzalvo, Clara Fischer, Hervé Glasel, Lise Van der Haegen, Audrey Bénézit, Ching-Po Lin, David N. Kennedy, Aya S. Ihara, Lucie Hertz-Pannier, Marie-Laure Moutard, Cyril Poupon, Marc Brysbaert, Neil Roberts, William D. Hopkins, Jean-François Mangin, and Ghislaine Dehaene-Lambertz. New human-specific brain landmark: the depth asymmetry of superior temporal sulcus.. Proc Natl Acad Sci U S A, 112(4):1208--1213, January 2015. [WWW] [PDF]
    Abstract: Identifying potentially unique features of the human cerebral cortex is a first step to understanding how evolution has shaped the brain in our species. By analyzing MR images obtained from 177 humans and 73 chimpanzees, we observed a human-specific asymmetry in the superior temporal sulcus at the heart of the communication regions and which we have na